3D structure

PDB id
7N2U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.53 Å

Loop

Sequence
CUAAAGAGUAACG
Length
13 nucleotides
Bulged bases
7N2U|1|23|A|2268, 7N2U|1|23|C|2275
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7N2U_086 not in the Motif Atlas
Homologous match to HL_5J7L_187
Geometric discrepancy: 0.0572
The information below is about HL_5J7L_187
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91939.2
Basepair signature
cWW-tSH-tHH-tWW-F-F-F
Number of instances in this motif group
8

Unit IDs

7N2U|1|23|C|2264
7N2U|1|23|U|2265
7N2U|1|23|A|2266
7N2U|1|23|A|2267
7N2U|1|23|A|2268
7N2U|1|23|G|2269
7N2U|1|23|A|2270
7N2U|1|23|G|2271
7N2U|1|23|U|2272
7N2U|1|23|A|2273
7N2U|1|23|A|2274
7N2U|1|23|C|2275
7N2U|1|23|G|2276

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LP
50S ribosomal protein L16
Chain La
50S ribosomal protein L27

Coloring options:


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