HL_7N2U_108
3D structure
- PDB id
- 7N2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- GACU(U8U)UU(T6A)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: U8U, T6A, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N2U_108 not in the Motif Atlas
- Homologous match to HL_5IB8_208
- Geometric discrepancy: 0.3349
- The information below is about HL_5IB8_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36684.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7N2U|1|Pt|G|30
7N2U|1|Pt|A|31
7N2U|1|Pt|C|32
7N2U|1|Pt|U|33
7N2U|1|Pt|U8U|34
7N2U|1|Pt|U|35
7N2U|1|Pt|U|36
7N2U|1|Pt|T6A|37
7N2U|1|Pt|A|38
7N2U|1|Pt|PSU|39
7N2U|1|Pt|C|40
Current chains
- Chain Pt
- tRNA
Nearby chains
- Chain 16
- Small subunit ribosomal RNA; SSU rRNA
- Chain 23
- Large subunit ribosomal RNA; LSU rRNA
- Chain SL
- 30S ribosomal protein S12
- Chain mR
- mRNA
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