HL_7N2V_062

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

7N2V|1|23|A|1175, 7N2V|1|23|U|1176

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2V_062 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.349

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7N2V|1|23|C|1172
7N2V|1|23|U|1173
7N2V|1|23|U|1174
7N2V|1|23|A|1175
7N2V|1|23|U|1176
7N2V|1|23|G|1177

Current chains

Chain 23

23S rRNA

Nearby chains