HL_7N8B_018

3D structure

PDB id

7N8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cycloheximide bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GUCUUC

Length

6 nucleotides

Bulged bases

7N8B|1|A1|C|765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N8B_018 not in the Motif Atlas

Homologous match to HL_8C3A_018

Geometric discrepancy: 0.1275

The information below is about HL_8C3A_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

7N8B|1|A1|G|763
7N8B|1|A1|U|764
7N8B|1|A1|C|765
7N8B|1|A1|U|766
7N8B|1|A1|U|767
7N8B|1|A1|C|768

Current chains

Chain A1

25S

Nearby chains

Chain AL

60S ribosomal protein L13-A