HL_7N8B_081
3D structure
- PDB id
- 7N8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cycloheximide bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- CGACCCUUUGGAAG
- Length
- 14 nucleotides
- Bulged bases
- 7N8B|1|B5|C|191, 7N8B|1|B5|U|192, 7N8B|1|B5|U|194
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N8B_081 not in the Motif Atlas
- Geometric match to HL_5TBW_012
- Geometric discrepancy: 0.3918
- The information below is about HL_5TBW_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7N8B|1|B5|C|186
7N8B|1|B5|G|187
7N8B|1|B5|A|188
7N8B|1|B5|C|189
7N8B|1|B5|C|190
7N8B|1|B5|C|191
7N8B|1|B5|U|192
7N8B|1|B5|U|193
7N8B|1|B5|U|194
7N8B|1|B5|G|195
7N8B|1|B5|G|196
7N8B|1|B5|A|197
7N8B|1|B5|A|198
7N8B|1|B5|G|199
Current chains
- Chain B5
- 18S RIBOSOMAL RNA
Nearby chains
- Chain BI
- 40S ribosomal protein S8-A
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