HL_7N8B_118
3D structure
- PDB id
- 7N8B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cycloheximide bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- (OMU)UCAG(OMU)GUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N8B_118 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.0811
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7N8B|1|A1|OMU|2724
7N8B|1|A1|U|2725
7N8B|1|A1|C|2726
7N8B|1|A1|A|2727
7N8B|1|A1|G|2728
7N8B|1|A1|OMU|2729
7N8B|1|A1|G|2730
7N8B|1|A1|U|2731
7N8B|1|A1|G|2732
Current chains
- Chain A1
- 25S
Nearby chains
- Chain AQ
- 60S ribosomal protein L18-A
- Chain AT
- 60S ribosomal protein L21-A
- Chain Aa
- 60S ribosomal protein L28
- Chain Ao
- 60S ribosomal protein L42-A
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