HL_7NAC_044

3D structure

PDB id

7NAC (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

7NAC|1|1|G|2371, 7NAC|1|1|A|2372, 7NAC|1|1|A|2373, 7NAC|1|1|G|2376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAC_044 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2471

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

7NAC|1|1|G|2369
7NAC|1|1|G|2370
7NAC|1|1|G|2371
7NAC|1|1|A|2372
7NAC|1|1|A|2373
7NAC|1|1|C|2374
7NAC|1|1|G|2375
7NAC|1|1|G|2376
7NAC|1|1|G|2377
7NAC|1|1|C|2378

Current chains

Chain 1

25S rRNA

Nearby chains

Chain s

Nuclear GTP-binding protein NUG1