HL_7NAC_049

3D structure

PDB id

7NAC (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

7NAC|1|1|G|2966

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAC_049 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1212

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

7NAC|1|1|C|2963
7NAC|1|1|G|2964
7NAC|1|1|U|2965
7NAC|1|1|G|2966
7NAC|1|1|A|2967
7NAC|1|1|G|2968

Current chains

Chain 1

25S rRNA

Nearby chains

Chain 7

60S ribosomal subunit assembly/export protein LOC1

Chain l

60S ribosome subunit biogenesis protein NIP7

Chain r

Ribosome biogenesis protein NSA2