HL_7NAC_054

3D structure

PDB id

7NAC (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CGGAAAGG

Length

8 nucleotides

Bulged bases

7NAC|1|1|A|3243, 7NAC|1|1|A|3244

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAC_054 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.0795

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

7NAC|1|1|C|3240
7NAC|1|1|G|3241
7NAC|1|1|G|3242
7NAC|1|1|A|3243
7NAC|1|1|A|3244
7NAC|1|1|A|3245
7NAC|1|1|G|3246
7NAC|1|1|G|3247

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain O

60S ribosomal protein L16-A