HL_7NAC_060

3D structure

PDB id

7NAC (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

AUUCU

Length

5 nucleotides

Bulged bases

7NAC|1|6|C|15

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAC_060 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.1631

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

7NAC|1|6|A|12
7NAC|1|6|U|13
7NAC|1|6|U|14
7NAC|1|6|C|15
7NAC|1|6|U|16

Current chains

Chain 6

5.8S ribosomal RNA gene and internal transcribed spacer 2

Nearby chains

Chain K

Proteasome-interacting protein CIC1