HL_7NAR_025

3D structure

PDB id

7NAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7NAR|1|A|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAR_025 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.0832

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7NAR|1|A|G|1089
7NAR|1|A|U|1090
7NAR|1|A|U|1091
7NAR|1|A|A|1092
7NAR|1|A|A|1093
7NAR|1|A|G|1094
7NAR|1|A|U|1095
7NAR|1|A|C|1096

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

30S ribosomal protein S2

Chain G

30S ribosomal protein S7