HL_7NAS_015

3D structure

PDB id

7NAS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state A (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAS_015 not in the Motif Atlas

Homologous match to HL_5J7L_015

Geometric discrepancy: 0.1701

The information below is about HL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7NAS|1|A|C|689
7NAS|1|A|G|690
7NAS|1|A|G|691
7NAS|1|A|U|692
7NAS|1|A|G|693
7NAS|1|A|A|694
7NAS|1|A|A|695
7NAS|1|A|A|696
7NAS|1|A|U|697
7NAS|1|A|G|698

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11

Chain U

30S ribosomal protein S21