HL_7NAT_006

3D structure

PDB id

7NAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

7NAT|1|A|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAT_006 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.1242

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7NAT|1|A|G|259
7NAT|1|A|G|260
7NAT|1|A|U|261
7NAT|1|A|A|262
7NAT|1|A|A|263
7NAT|1|A|C|264
7NAT|1|A|G|265
7NAT|1|A|G|266
7NAT|1|A|C|267

Current chains

Chain A

16S rRNA

Nearby chains

Chain Q

30S ribosomal protein S17

Chain T

30S ribosomal protein S20