HL_7NAT_017

3D structure

PDB id

7NAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAT_017 not in the Motif Atlas

Homologous match to HL_4LFB_017

Geometric discrepancy: 0.1862

The information below is about HL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7NAT|1|A|G|786
7NAT|1|A|A|787
7NAT|1|A|U|788
7NAT|1|A|U|789
7NAT|1|A|A|790
7NAT|1|A|G|791
7NAT|1|A|A|792
7NAT|1|A|U|793
7NAT|1|A|A|794
7NAT|1|A|C|795
7NAT|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11