HL_7NAU_008

3D structure

PDB id

7NAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state C (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.78 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAU_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.1164

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7NAU|1|A|A|320
7NAU|1|A|A|321
7NAU|1|A|C|322
7NAU|1|A|U|323
7NAU|1|A|G|324
7NAU|1|A|A|325
7NAU|1|A|G|326
7NAU|1|A|A|327
7NAU|1|A|C|328
7NAU|1|A|A|329
7NAU|1|A|C|330
7NAU|1|A|G|331
7NAU|1|A|G|332
7NAU|1|A|U|333

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20