HL_7NAW_008

3D structure

PDB id

7NAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.05 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAW_008 not in the Motif Atlas

Homologous match to HL_6CZR_079

Geometric discrepancy: 0.1817

The information below is about HL_6CZR_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.2

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7NAW|1|A|A|320
7NAW|1|A|A|321
7NAW|1|A|C|322
7NAW|1|A|U|323
7NAW|1|A|G|324
7NAW|1|A|A|325
7NAW|1|A|G|326
7NAW|1|A|A|327
7NAW|1|A|C|328
7NAW|1|A|A|329
7NAW|1|A|C|330
7NAW|1|A|G|331
7NAW|1|A|G|332
7NAW|1|A|U|333

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain T

Small ribosomal subunit protein bS20