HL_7NAX_008

3D structure

PDB id

7NAX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAX_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0779

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7NAX|1|A|A|320
7NAX|1|A|A|321
7NAX|1|A|C|322
7NAX|1|A|U|323
7NAX|1|A|G|324
7NAX|1|A|A|325
7NAX|1|A|G|326
7NAX|1|A|A|327
7NAX|1|A|C|328
7NAX|1|A|A|329
7NAX|1|A|C|330
7NAX|1|A|G|331
7NAX|1|A|G|332
7NAX|1|A|U|333

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20