HL_7NFX_020
3D structure
- PDB id
- 7NFX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UCGCACGAAA
- Length
- 10 nucleotides
- Bulged bases
- 7NFX|1|5|C|1367, 7NFX|1|5|A|1371
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NFX_020 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.3982
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
7NFX|1|5|U|1364
7NFX|1|5|C|1365
7NFX|1|5|G|1366
7NFX|1|5|C|1367
7NFX|1|5|A|1368
7NFX|1|5|C|1369
7NFX|1|5|G|1370
7NFX|1|5|A|1371
7NFX|1|5|A|1372
7NFX|1|5|A|1373
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C
- 60S ribosomal protein L4
- Chain L
- 60S ribosomal protein L13
- Chain N
- Ribosomal protein L15
- Chain Y
- Ribosomal protein L26
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