HL_7NHK_017
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUUGUAGAA
- Length
- 10 nucleotides
- Bulged bases
- 7NHK|1|A|A|610
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NHK_017 not in the Motif Atlas
- Geometric match to HL_4WF9_018
- Geometric discrepancy: 0.098
- The information below is about HL_4WF9_018
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.4
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 137
Unit IDs
7NHK|1|A|U|602
7NHK|1|A|U|603
7NHK|1|A|U|604
7NHK|1|A|U|605
7NHK|1|A|G|606
7NHK|1|A|U|607
7NHK|1|A|A|608
7NHK|1|A|G|609
7NHK|1|A|A|610
7NHK|1|A|A|611
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain O
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L21
Coloring options: