HL_7NHK_054

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

7NHK|1|A|A|2281, 7NHK|1|A|C|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_054 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.1058

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7NHK|1|A|C|2277
7NHK|1|A|U|2278
7NHK|1|A|A|2279
7NHK|1|A|A|2280
7NHK|1|A|A|2281
7NHK|1|A|A|2282
7NHK|1|A|G|2283
7NHK|1|A|G|2284
7NHK|1|A|U|2285
7NHK|1|A|A|2286
7NHK|1|A|A|2287
7NHK|1|A|C|2288
7NHK|1|A|G|2289

Current chains

Chain A

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27