HL_7NHM_046
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUAUCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7NHM|1|A|A|1807, 7NHM|1|A|U|1808, 7NHM|1|A|C|1809, 7NHM|1|A|A|1813
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NHM_046 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.12
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7NHM|1|A|U|1804
7NHM|1|A|U|1805
7NHM|1|A|U|1806
7NHM|1|A|A|1807
7NHM|1|A|U|1808
7NHM|1|A|C|1809
7NHM|1|A|A|1810
7NHM|1|A|A|1811
7NHM|1|A|A|1812
7NHM|1|A|A|1813
7NHM|1|A|A|1814
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L34
- Chain G
- 50S ribosomal protein L2
Coloring options: