HL_7NHM_062

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHM_062 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1725

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7NHM|1|A|C|2578
7NHM|1|A|U|2579
7NHM|1|A|G|2580
7NHM|1|A|U|2581
7NHM|1|A|U|2582
7NHM|1|A|C|2583
7NHM|1|A|G|2584

Current chains

Chain A

23S rRNA

Nearby chains