HL_7NHM_067

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7NHM|1|A|C|2822

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHM_067 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3297

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7NHM|1|A|C|2819
7NHM|1|A|U|2820
7NHM|1|A|U|2821
7NHM|1|A|C|2822
7NHM|1|A|G|2823
7NHM|1|A|G|2824

Current chains

Chain A

23S rRNA

Nearby chains