HL_7NHN_024

3D structure

PDB id

7NHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGAAAUU

Length

7 nucleotides

Bulged bases

7NHN|1|A|A|827, 7NHN|1|A|U|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHN_024 not in the Motif Atlas

Geometric match to HL_6JQ6_004

Geometric discrepancy: 0.3447

The information below is about HL_6JQ6_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

7NHN|1|A|A|825
7NHN|1|A|G|826
7NHN|1|A|A|827
7NHN|1|A|A|828
7NHN|1|A|A|829
7NHN|1|A|U|830
7NHN|1|A|U|831

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L2