HL_7NHN_050

3D structure

PDB id

7NHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCUAG

Length

6 nucleotides

Bulged bases

7NHN|1|A|C|2178

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHN_050 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.3211

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

7NHN|1|A|C|2176
7NHN|1|A|G|2177
7NHN|1|A|C|2178
7NHN|1|A|U|2179
7NHN|1|A|A|2180
7NHN|1|A|G|2181

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

Lmo0919 protein