HL_7NHN_081
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACUGAGACACGGC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NHN_081 not in the Motif Atlas
- Homologous match to HL_5J7L_008
- Geometric discrepancy: 0.1006
- The information below is about HL_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7NHN|1|a|G|330
7NHN|1|a|A|331
7NHN|1|a|C|332
7NHN|1|a|U|333
7NHN|1|a|G|334
7NHN|1|a|A|335
7NHN|1|a|G|336
7NHN|1|a|A|337
7NHN|1|a|C|338
7NHN|1|a|A|339
7NHN|1|a|C|340
7NHN|1|a|G|341
7NHN|1|a|G|342
7NHN|1|a|C|343
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain q
- 30S ribosomal protein S16
- Chain u
- 30S ribosomal protein S20
Coloring options: