HL_7NQH_020
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAUAGAGUGC
- Length
- 11 nucleotides
- Bulged bases
- 7NQH|1|AA|U|803, 7NQH|1|AA|U|808
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NQH_020 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.3607
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7NQH|1|AA|G|800
7NQH|1|AA|A|801
7NQH|1|AA|A|802
7NQH|1|AA|U|803
7NQH|1|AA|A|804
7NQH|1|AA|G|805
7NQH|1|AA|A|806
7NQH|1|AA|G|807
7NQH|1|AA|U|808
7NQH|1|AA|G|809
7NQH|1|AA|C|810
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AI
- uS9m
- Chain AJ
- Mitochondrial ribosomal protein S10
- Chain AN
- Mitochondrial ribosomal protein S14
- Chain Ai
- mS33
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