HL_7NQH_040

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUUAAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_040 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.1879

The information below is about HL_6PRV_002

Detailed Annotation

GNRA with tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7NQH|1|BA|C|536
7NQH|1|BA|G|537
7NQH|1|BA|U|538
7NQH|1|BA|U|539
7NQH|1|BA|A|540
7NQH|1|BA|A|541
7NQH|1|BA|A|542
7NQH|1|BA|G|543

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B9

Ribosomal protein

Chain BK

Mitochondrial ribosomal protein L11

Chain Bq

mL54