HL_7NQH_046
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7NQH|1|BA|A|832, 7NQH|1|BA|C|833, 7NQH|1|BA|C|834, 7NQH|1|BA|A|838
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NQH_046 not in the Motif Atlas
- Homologous match to HL_5J7L_178
- Geometric discrepancy: 0.1378
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7NQH|1|BA|U|829
7NQH|1|BA|U|830
7NQH|1|BA|U|831
7NQH|1|BA|A|832
7NQH|1|BA|C|833
7NQH|1|BA|C|834
7NQH|1|BA|A|835
7NQH|1|BA|A|836
7NQH|1|BA|A|837
7NQH|1|BA|A|838
7NQH|1|BA|A|839
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B7
- Mitochondrial ribosomal protein L34
- Chain BD
- uL2m
- Chain BW
- uL22m
- Chain Bi
- Mitochondrial ribosomal protein L45
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