HL_7NQH_050

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCCAAAUAA

Length

9 nucleotides

Bulged bases

7NQH|1|BA|U|950

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_050 not in the Motif Atlas

Geometric match to HL_5TBW_050

Geometric discrepancy: 0.1702

The information below is about HL_5TBW_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7NQH|1|BA|U|944
7NQH|1|BA|C|945
7NQH|1|BA|C|946
7NQH|1|BA|A|947
7NQH|1|BA|A|948
7NQH|1|BA|A|949
7NQH|1|BA|U|950
7NQH|1|BA|A|951
7NQH|1|BA|A|952

Current chains

Chain BA

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BL

Peptide chain release factor 1-like, mitochondrial

Chain BO

uL14m