HL_7NQL_012
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UACAUAACAAA
- Length
- 11 nucleotides
- Bulged bases
- 7NQL|1|AA|U|471, 7NQL|1|AA|A|476
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NQL_012 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.3187
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40612.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
7NQL|1|AA|U|467
7NQL|1|AA|A|468
7NQL|1|AA|C|469
7NQL|1|AA|A|470
7NQL|1|AA|U|471
7NQL|1|AA|A|472
7NQL|1|AA|A|473
7NQL|1|AA|C|474
7NQL|1|AA|A|475
7NQL|1|AA|A|476
7NQL|1|AA|A|477
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AB
- Mitochondrial ribosomal protein S2
- Chain AE
- Mitochondrial ribosomal protein S5
- Chain AF
- bS6m
- Chain Ab
- mS23
- Chain Am
- mS37
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