HL_7NQL_021

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAACCUAUA

Length

9 nucleotides

Bulged bases

7NQL|1|AA|C|884, 7NQL|1|AA|U|885

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_021 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.3248

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92598.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

7NQL|1|AA|U|880
7NQL|1|AA|A|881
7NQL|1|AA|A|882
7NQL|1|AA|C|883
7NQL|1|AA|C|884
7NQL|1|AA|U|885
7NQL|1|AA|A|886
7NQL|1|AA|U|887
7NQL|1|AA|A|888

Current chains

Chain AA

12S rRNA

Nearby chains

Chain Ae

Mitochondrial ribosomal protein S27

Chain Aj

mS34