HL_7NQL_037

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUACAGC

Length

8 nucleotides

Bulged bases

7NQL|1|BA|A|445, 7NQL|1|BA|G|448

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_037 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.1417

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7NQL|1|BA|G|442
7NQL|1|BA|G|443
7NQL|1|BA|U|444
7NQL|1|BA|A|445
7NQL|1|BA|C|446
7NQL|1|BA|A|447
7NQL|1|BA|G|448
7NQL|1|BA|C|449

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BJ

Mitochondrial ribosomal protein L10

Chain BQ

uL16m

Chain Bt

Mitochondrial ribosomal protein L57