HL_7NQL_056
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAAACCAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NQL_056 not in the Motif Atlas
- Geometric match to HL_4WF9_053
- Geometric discrepancy: 0.1525
- The information below is about HL_4WF9_053
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_87268.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7NQL|1|BA|C|1198
7NQL|1|BA|A|1199
7NQL|1|BA|A|1200
7NQL|1|BA|A|1201
7NQL|1|BA|C|1202
7NQL|1|BA|C|1203
7NQL|1|BA|A|1204
7NQL|1|BA|G|1205
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B0
- Mitochondrial ribosomal protein L27
- Chain B8
- Mitochondrial ribosomal protein L35
- Chain BP
- uL15m
- Chain Bb
- Mitochondrial ribosomal protein L38
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