HL_7NQL_060

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_060 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1454

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7NQL|1|BA|U|1374
7NQL|1|BA|U|1375
7NQL|1|BA|G|1376
7NQL|1|BA|U|1377
7NQL|1|BA|U|1378
7NQL|1|BA|C|1379
7NQL|1|BA|A|1380

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BL

Peptidyl-tRNA hydrolase ICT1, mitochondrial