HL_7NQL_071

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCCU

Length

4 nucleotides

Bulged bases

7NQL|1|BA|C|655

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_071 not in the Motif Atlas

Geometric match to HL_2UWM_002

Geometric discrepancy: 0.2937

The information below is about HL_2UWM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.6

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

7NQL|1|BA|G|654
7NQL|1|BA|C|655
7NQL|1|BA|C|656
7NQL|1|BA|U|657

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B5

bL32m

Chain BR

bL17m

Chain Bw

39S ribosomal protein S30, mitochondrial