HL_7NRD_097
3D structure
- PDB id
- 7NRD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.36 Å
Loop
- Sequence
- CUAUUUUGUUGGUUUCUAG
- Length
- 19 nucleotides
- Bulged bases
- 7NRD|1|S2|U|833
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NRD_097 not in the Motif Atlas
- Homologous match to HL_8P9A_208
- Geometric discrepancy: 0.2287
- The information below is about HL_8P9A_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NRD|1|S2|C|827
7NRD|1|S2|U|828
7NRD|1|S2|A|829
7NRD|1|S2|U|830
7NRD|1|S2|U|831
7NRD|1|S2|U|832
7NRD|1|S2|U|833
7NRD|1|S2|G|834
7NRD|1|S2|U|835
7NRD|1|S2|U|836
7NRD|1|S2|G|837
7NRD|1|S2|G|838
7NRD|1|S2|U|839
7NRD|1|S2|U|840
7NRD|1|S2|U|841
7NRD|1|S2|C|842
7NRD|1|S2|U|843
7NRD|1|S2|A|844
7NRD|1|S2|G|845
Current chains
- Chain S2
- TPA_inf: Saccharomyces cerevisiae S288C chromosome XII, complete sequence
Nearby chains
- Chain SX
- 40S ribosomal protein S11-A
Coloring options: