HL_7NSI_014

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

7NSI|1|AA|C|576

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_014 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.3624

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7NSI|1|AA|G|568
7NSI|1|AA|A|569
7NSI|1|AA|U|570
7NSI|1|AA|A|571
7NSI|1|AA|A|572
7NSI|1|AA|A|573
7NSI|1|AA|C|574
7NSI|1|AA|C|575
7NSI|1|AA|C|576
7NSI|1|AA|C|577

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AI

28S ribosomal protein S9, mitochondrial

Chain AJ

28S ribosomal protein S10, mitochondrial

Chain AV

tRNA (P/E)