HL_7NSI_016
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UAAAAA
- Length
- 6 nucleotides
- Bulged bases
- 7NSI|1|AA|A|637, 7NSI|1|AA|A|640
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NSI_016 not in the Motif Atlas
- Geometric match to HL_5J7L_204
- Geometric discrepancy: 0.1182
- The information below is about HL_5J7L_204
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 46
Unit IDs
7NSI|1|AA|U|636
7NSI|1|AA|A|637
7NSI|1|AA|A|638
7NSI|1|AA|A|639
7NSI|1|AA|A|640
7NSI|1|AA|A|641
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AB
- 28S ribosomal protein S2, mitochondrial
- Chain AE
- 28S ribosomal protein S5, mitochondrial isoform X2
- Chain AF
- Mitochondrial ribosomal protein S6
- Chain Ab
- Mitochondrial ribosomal protein S23
- Chain Am
- Coiled-coil-helix-coiled-coil-helix domain containing 1
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