HL_7NSI_034

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GGUACAGC

Length

8 nucleotides

Bulged bases

7NSI|1|BA|A|445, 7NSI|1|BA|G|448

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_034 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.1455

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7NSI|1|BA|G|442
7NSI|1|BA|G|443
7NSI|1|BA|U|444
7NSI|1|BA|A|445
7NSI|1|BA|C|446
7NSI|1|BA|A|447
7NSI|1|BA|G|448
7NSI|1|BA|C|449

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BJ

39S ribosomal protein L10, mitochondrial isoform a

Chain BQ

39S ribosomal protein L16, mitochondrial

Chain Bt

Mitochondrial ribosomal protein L57