HL_7NSI_040

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

AAUAAU

Length

6 nucleotides

Bulged bases

7NSI|1|BA|A|689

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_040 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3628

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7NSI|1|BA|A|688
7NSI|1|BA|A|689
7NSI|1|BA|U|690
7NSI|1|BA|A|691
7NSI|1|BA|A|692
7NSI|1|BA|U|693

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BR

39S ribosomal protein L17, mitochondrial

Chain BW

39S ribosomal protein L22, mitochondrial