HL_7NSI_056

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UGCAACCG

Length

8 nucleotides

Bulged bases

7NSI|1|BA|G|1352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_056 not in the Motif Atlas

Homologous match to HL_7A0S_060

Geometric discrepancy: 0.2621

The information below is about HL_7A0S_060

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7NSI|1|BA|U|1351
7NSI|1|BA|G|1352
7NSI|1|BA|C|1353
7NSI|1|BA|A|1354
7NSI|1|BA|A|1355
7NSI|1|BA|C|1356
7NSI|1|BA|C|1357
7NSI|1|BA|G|1358

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B9

Ribosomal protein