HL_7NSI_064
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- ACUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NSI_064 not in the Motif Atlas
- Homologous match to HL_6UFM_002
- Geometric discrepancy: 0.2898
- The information below is about HL_6UFM_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
7NSI|1|BB|A|32
7NSI|1|BB|C|33
7NSI|1|BB|U|34
7NSI|1|BB|G|35
7NSI|1|BB|A|36
7NSI|1|BB|A|37
7NSI|1|BB|A|38
7NSI|1|BB|A|39
7NSI|1|BB|U|40
Current chains
- Chain BB
- CP tRNAPhe
Nearby chains
- Chain B0
- 39S ribosomal protein L27, mitochondrial
- Chain B4
- Mitochondrial ribosomal protein L55
- Chain BS
- 39S ribosomal protein L18, mitochondrial isoform 1
- Chain Bb
- 39S ribosomal protein L38, mitochondrial
- Chain Bd
- Mitochondrial ribosomal protein L40
- Chain Bj
- 39S ribosomal protein L46, mitochondrial
- Chain Bk
- 39S ribosomal protein L48, mitochondrial
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