HL_7NSO_032

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUAGAAGCA

Length

9 nucleotides

Bulged bases

7NSO|1|A|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSO_032 not in the Motif Atlas

Geometric match to HL_1U9S_001

Geometric discrepancy: 0.3514

The information below is about HL_1U9S_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7NSO|1|A|U|1065
7NSO|1|A|U|1066
7NSO|1|A|A|1067
7NSO|1|A|G|1068
7NSO|1|A|A|1069
7NSO|1|A|A|1070
7NSO|1|A|G|1071
7NSO|1|A|C|1072
7NSO|1|A|A|1073

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains