HL_7NSO_057

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7NSO|1|A|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSO_057 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.0907

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

7NSO|1|A|C|2248
7NSO|1|A|U|2249
7NSO|1|A|G|2250
7NSO|1|A|G|2251
7NSO|1|A|G|2252
7NSO|1|A|G|2253
7NSO|1|A|C|2254
7NSO|1|A|G|2255
7NSO|1|A|G|2256

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains

Chain 8

Transfer RNA; tRNA

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27