HL_7NSO_070

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7NSO|1|A|G|2751, 7NSO|1|A|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSO_070 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0745

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7NSO|1|A|C|2745
7NSO|1|A|U|2746
7NSO|1|A|G|2747
7NSO|1|A|A|2748
7NSO|1|A|A|2749
7NSO|1|A|A|2750
7NSO|1|A|G|2751
7NSO|1|A|C|2752
7NSO|1|A|A|2753
7NSO|1|A|U|2754
7NSO|1|A|C|2755
7NSO|1|A|U|2756
7NSO|1|A|A|2757
7NSO|1|A|A|2758
7NSO|1|A|G|2759

Current chains

Chain A

23S rRNA (2903-MER)

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13