HL_7NSO_093

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

7NSO|1|a|U|842, 7NSO|1|a|G|844, 7NSO|1|a|A|845

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSO_093 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3837

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7NSO|1|a|C|840
7NSO|1|a|C|841
7NSO|1|a|U|842
7NSO|1|a|U|843
7NSO|1|a|G|844
7NSO|1|a|A|845
7NSO|1|a|G|846

Current chains

Chain a

16S rRNA (1540-MER)

Nearby chains

Chain r

30S ribosomal protein S18