HL_7NSO_101

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUCCGGCC

Length

9 nucleotides

Bulged bases

7NSO|1|a|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSO_101 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.3536

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7NSO|1|a|G|1133
7NSO|1|a|G|1134
7NSO|1|a|U|1135
7NSO|1|a|C|1136
7NSO|1|a|C|1137
7NSO|1|a|G|1138
7NSO|1|a|G|1139
7NSO|1|a|C|1140
7NSO|1|a|C|1141

Current chains

Chain a

16S rRNA (1540-MER)

Nearby chains

Chain i

30S ribosomal protein S9