HL_7NSP_019

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

7NSP|1|A|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSP_019 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.1099

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7NSP|1|A|C|487
7NSP|1|A|G|488
7NSP|1|A|G|489
7NSP|1|A|C|490
7NSP|1|A|G|491
7NSP|1|A|A|492
7NSP|1|A|G|493

Current chains

Chain A

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L22

Chain U

50S ribosomal protein L24