HL_7NSP_057

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7NSP|1|A|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSP_057 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.1182

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7NSP|1|A|C|2248
7NSP|1|A|U|2249
7NSP|1|A|G|2250
7NSP|1|A|G|2251
7NSP|1|A|G|2252
7NSP|1|A|G|2253
7NSP|1|A|C|2254
7NSP|1|A|G|2255
7NSP|1|A|G|2256

Current chains

Chain A

23S rRNA

Nearby chains

Chain 8

Transfer RNA; tRNA

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27